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Mulholland, Claire V. and Shockey, Abigail C. and Aung, Htin L. and Cursons, Ray T. and O’Toole, Ronan F. and Gautam, Sanjay S. and Brites, Daniela and Gagneux, Sebastien and Roberts, Sally A. and Karalus, Noel and Cook, Gregory M. and Pepperell, Caitlin S. and Arcus, Vickery L. (2019) Dispersal of Mycobacterium tuberculosis Driven by Historical European Trade in the South Pacific. Frontiers in Microbiology, 10 . ISSN 1664-302X

Gautam, Sanjay S. and Leong, Kelvin W. C. and Pradhan, Manoj and Singh, Y. Ibotomba and Rajbhandari, Sagar K. and Ghimire, Gokarna R. and Adhikari, Krishna and Shrestha, Uma and Chaudhary, Raina and Ghimire, Gyanendra and Khadka, Sundar and O’Toole, Ronan F. (2020) Draft genome sequence of an isolate of Extensively drug-resistant Mycobacterium tuberculosis from Nepal. Microbiology Resource Announcements, 9 (4). ISSN 2576-098X

Leong, Kelvin W. C. and Cooley, Louise A. and Anderson, Tara L. and Gautam, Sanjay S. and McEwan, Belinda and Wells, Anne and Wilson, Fiona and Hughson, Lucy and O’Toole, Ronan F. (2018) Emergence of Vancomycin-Resistant Enterococcus faecium at an Australian Hospital: A Whole Genome Sequencing Analysis. Scientific Reports, 8 (1). ISSN 2045-2322

Gautam, Sanjay S. and Haug, Greg and Cooley, Louise A. and Mac Aogáin, Micheál and O’Toole, Ronan F. (2019) Intercontinental translocation of latent multidrug‐resistant tuberculosis to Australia demonstrated by whole genome sequencing. Medical Journal of Australia, 210 (5). p. 236. ISSN 0025-729X

Hasnain, Seyed Ehtesham and Gautam, Sanjay S. and Mac Aogáin, Micheál and Cooley, Louise A. and Haug, Greg and Fyfe, Janet A. and Globan, Maria and O’Toole, Ronan F. (2018) Molecular epidemiology of tuberculosis in Tasmania and genomic characterisation of its first known multi-drug resistant case. PLOS ONE, 13 (2). e0192351. ISSN 1932-6203

O’Toole, Ronan F. and Gautam, Sanjay S. (2018) The host microbiome and impact of tuberculosis chemotherapy. Tuberculosis, 113 . pp. 26-29. ISSN 14729792

KC, Rajendra and Shukla, Shakti D. and Gautam, Sanjay S. and Hansbro, Philip M. and O’Toole, Ronan F. (2018) The role of environmental exposure to non-cigarette smoke in lung disease. Clinical and Translational Medicine, 7 (1). ISSN 2001-1326

Gautam, Sanjay S. and KC, Rajendra and Leong, Kelvin WC and Mac Aogáin, Micheál and O’Toole, Ronan F. (2019) A step-by-step beginner’s protocol for whole genome sequencing of human bacterial pathogens. Journal of Biological Methods, 6 (1). p. 110. ISSN 2326-9901