Book Chapter

O’Toole, Ronan F. (2019) Tuberculosis as an Underlying Etiological Factor for Other Human Respiratory Diseases. In: Mycobacterium Tuberculosis: Molecular Infection Biology, Pathogenesis, Diagnostics and New Interventions. Springer, pp. 17-26. UNSPECIFIED

O’Toole, Ronan F. (2019) Tuberculosis in New Zealand: Historical overview to modern Epidemiology. In: Mycobacterium Tuberculosis: Molecular Infection Biology, Pathogenesis, Diagnostics and New Interventions. Springer, pp. 87-99. UNSPECIFIED

Journal article

Gautam, Sanjay S. and KC, Rajendra and Leong, Kelvin WC and Mac Aogáin, Micheál and O’Toole, Ronan F. (2019) A step-by-step beginner’s protocol for whole genome sequencing of human bacterial pathogens. Journal of Biological Methods, 6 (1). p. 110. ISSN 2326-9901 UNSPECIFIED

Gautam, Sanjay S. and Leong, Kelvin W. C. and Pradhan, Manoj and Singh, Y. Ibotomba and Rajbhandari, Sagar K. and Ghimire, Gokarna R. and Adhikari, Krishna and Shrestha, Uma and Chaudhary, Raina and Ghimire, Gyanendra and Khadka, Sundar and O’Toole, Ronan F. (2020) Draft genome sequence of an isolate of Extensively drug-resistant Mycobacterium tuberculosis from Nepal. Microbiology Resource Announcements, 9 (4). ISSN 2576-098X UNSPECIFIED

Hasnain, Seyed Ehtesham and Gautam, Sanjay S. and Mac Aogáin, Micheál and Cooley, Louise A. and Haug, Greg and Fyfe, Janet A. and Globan, Maria and O’Toole, Ronan F. (2018) Molecular epidemiology of tuberculosis in Tasmania and genomic characterisation of its first known multi-drug resistant case. PLOS ONE, 13 (2). e0192351. ISSN 1932-6203 UNSPECIFIED

KC, Rajendra and Shukla, Shakti D. and Gautam, Sanjay S. and Hansbro, Philip M. and O’Toole, Ronan F. (2018) The role of environmental exposure to non-cigarette smoke in lung disease. Clinical and Translational Medicine, 7 (1). ISSN 2001-1326 UNSPECIFIED

Leong, Kelvin W. C. and Cooley, Louise A. and Anderson, Tara L. and Gautam, Sanjay S. and McEwan, Belinda and Wells, Anne and Wilson, Fiona and Hughson, Lucy and O’Toole, Ronan F. (2018) Emergence of Vancomycin-Resistant Enterococcus faecium at an Australian Hospital: A Whole Genome Sequencing Analysis. Scientific Reports, 8 (1). ISSN 2045-2322 UNSPECIFIED

Leong, Kelvin W. C. and Kalukottege, Ranmini and Cooley, Louise A. and Anderson, Tara L. and Wells, Anne and Langford, Emma and O’Toole, Ronan F. (2020) State-Wide genomic and epidemiological analyses of Vancomycin-Resistant Enterococcus faecium in Tasmania’s Public Hospitals. Frontiers in Microbiology, 10. ISSN 1664-302X UNSPECIFIED

Moorhead, S. M. and Griffiths, M. W. (2011) Expression and characterization of cell-signalling molecules in Campylobacter jejuni. Journal of Applied Microbiology, 110 (3). pp. 786-800. ISSN 1365-2672 UNSPECIFIED

Mulholland, Claire V. and Shockey, Abigail C. and Aung, Htin L. and Cursons, Ray T. and O’Toole, Ronan F. and Gautam, Sanjay S. and Brites, Daniela and Gagneux, Sebastien and Roberts, Sally A. and Karalus, Noel and Cook, Gregory M. and Pepperell, Caitlin S. and Arcus, Vickery L. (2019) Dispersal of Mycobacterium tuberculosis Driven by Historical European Trade in the South Pacific. Frontiers in Microbiology, 10. ISSN 1664-302X UNSPECIFIED

O’Toole, Ronan F. (2018) Development of a NewGenome-Wide MLST scheme for high-resolution typing of diverse Mycobacterium tuberculosis complex strains. EBioMedicine, 34. pp. 131-138. UNSPECIFIED

O’Toole, Ronan F. (2017) Draft Genome Sequence of New Vancomycin-Resistant Enterococcus faecium Sequence Type 1421. Genome Announcements, 44. UNSPECIFIED

O’Toole, Ronan F. (2018) Progress in the Development of Platelet-Activating Factor Receptor (PAFr) Antagonists and Applications in the Treatment of Inflammatory Diseases. ChemMedChem. UNSPECIFIED

O’Toole, Ronan F. and Gautam, Sanjay S. (2018) The host microbiome and impact of tuberculosis chemotherapy. Tuberculosis, 113. pp. 26-29. ISSN 14729792 UNSPECIFIED

Rajendra, K C and Zosky, Graeme R and Shukla, Shakti D and O’Toole, Ronan F. (2018) A cost-effective technique for generating preservable biomass smoke extract and measuring its effect on cell receptor expression in human bronchial epithelial cells. Biology Methods and Protocols, 3 (1). ISSN 2396-8923 UNSPECIFIED

Roycroft, E. and O’Toole, Ronan F. and Fitzgibbon, M.M. and Montgomery, L. and O'Meara, M. and Downes, P. and Jackson, S. and O'Donnell, J. and Laurenson, I.F. and McLaughlin, A.M. and Keane, J. and Rogers, T.R. (2018) Molecular epidemiology of multi- and extensively-drug-resistant Mycobacterium tuberculosis in Ireland, 2001–2014. Journal of Infection, 76 (1). pp. 55-67. ISSN 01634453 UNSPECIFIED

Shastri, Madhur D. and Shukla, Shakti Dhar and Chong, Wai Chin and Dua, Kamal and Peterson, Gregory M. and Patel, Rahul P. and Hansbro, Philip M. and Eri, Rajaraman and O’Toole, Ronan F. (2018) Role of oxidative stress in the pathology and management of human tuberculosis. Oxidative Medicine and Cellular Longevity, 2018. pp. 1-10. ISSN 1942-0900 UNSPECIFIED

Shukla, Shakti D. and Walters, E. Haydn and Simpson, Jodie L. and Keely, Simon and Wark, Peter A.B. and O’Toole, Ronan F. and Hansbro, Philip M. (2020) Hypoxia‐inducible factor and bacterial infections in chronic obstructive pulmonary disease. Respirology, 25 (1). pp. 53-63. ISSN 1323-7799 UNSPECIFIED

Yen, Seiha and Preissner, Melissa and Bennett, Ellen and Dubsky, Stephen and Carnibella, Richard and O’Toole, Ronan F. and Roddam, Louise and Jones, Heather and Dargaville, Peter A. and Fouras, Andreas and Zosky, Graeme R. (2019) The link between regional tidal stretch and lung injury during mechanical ventilation. American Journal of Respiratory Cell and Molecular Biology, 60 (5). pp. 569-577. ISSN 1044-1549 UNSPECIFIED

Conference or Workshop Item

Lalappan, M.K. and Moorhead, S. M. and Parkar, Shanthi (2013) A model to study the inhibition of bacterial contamination of vegetable sprouts by plant based polyphenols. In: New Zealand Microbiology Society Conference, 26-28 November, 2013, Hamilton, New Zealand. (Submitted) UNSPECIFIED

McElroy, Amber and Moorhead, S. M. (2013) Validation of high throughput comet assay to study gut health effects of prebiotics. In: New Zealand Microbiological Society Conference, 26-28 November 2013, Hamilton, New Zealand. UNSPECIFIED

Item presented at a conference, workshop or other event, and published in the proceedings

Jones, Rhys J and Johnson, R and Maclean, P and Cave, V and Adam, K and Siva, J and Jauregui, R and Bell, N and Fleetwood, D (2017) More than just plants: A study of biotic stress impacts on the root microbiomes of Trifolium repens. [Item presented at a conference, workshop or other event, and published in the proceedings] UNSPECIFIED

Report

Care, Debbie (2016) An overview of Biodigesters and NZ Agriculture. [Report] (Unpublished) UNSPECIFIED